9FVF
UMG-SP3 amidase from uncultured bacterium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-09-15 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.873130 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 90.707, 90.707, 278.114 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.420 - 2.320 |
R-factor | 0.1908 |
Rwork | 0.188 |
R-free | 0.24970 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.141 |
Data reduction software | XDS |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.420 | 2.408 |
High resolution limit [Å] | 2.320 | 2.320 |
Rmerge | 0.037 | 0.645 |
Rmeas | 0.052 | |
Rpim | 0.037 | 0.645 |
Number of reflections | 50769 | 4908 |
<I/σ(I)> | 15.86 | 1.25 |
Completeness [%] | 99.5 | 98.46 |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.684 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Hepes pH 7.5 4 M Ammonium Acetate |