9FVC
Crystal structure of VcSiaP in complex with a VHH antibody (VHH_VcP#1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-17 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.999 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 169.607, 72.366, 85.604 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.180 - 2.640 |
R-factor | 0.2229 |
Rwork | 0.221 |
R-free | 0.25370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.830 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (v1.20.1-4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.180 | 2.710 |
High resolution limit [Å] | 2.640 | 2.640 |
Rmerge | 0.097 | 0.530 |
Number of reflections | 31540 | 2153 |
<I/σ(I)> | 6.9 | |
Completeness [%] | 99.6 | |
Redundancy | 2 | |
CC(1/2) | 0.988 | 0.623 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293.15 | Tris BICINE, pH 8.5, PEG 550 MME, PEG 20000, Sodium fluoride, Sodium bromide, Sodium iodide |