9FVB
Crystal structure of VcSiaP in complex with a VHH antibody (VHH_VcP#2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-17 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.999 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 151.296, 50.340, 133.994 |
Unit cell angles | 90.00, 114.88, 90.00 |
Refinement procedure
Resolution | 46.380 - 2.050 |
R-factor | 0.1973 |
Rwork | 0.195 |
R-free | 0.25720 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.202 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.380 | 2.130 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.098 | 0.794 |
Number of reflections | 57531 | 10986 |
<I/σ(I)> | 7.48 | |
Completeness [%] | 99.5 | |
Redundancy | 2 | |
CC(1/2) | 0.992 | 0.436 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293.15 | Imidazole, MES monohydrate, pH 6.5, PEG 550 MME, PEG 20000, 1,6-Hexanediol, 1-Butanol, 1,2-Propanediol, 2-Propanol, 1,4-Butanediol, 1,3-Propanediol |