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Crystal structure of human IgD-Fc

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2023-05-08
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.6888
Spacegroup nameP 1 21 1
Unit cell lengths105.825, 43.667, 121.470
Unit cell angles90.00, 107.96, 90.00
Refinement procedure
Resolution52.450 - 3.000
R-factor0.2313
Rwork0.228
R-free0.28820
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.670
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.4503.180
High resolution limit [Å]3.0003.000
Rpim0.1420.504
Number of reflections217693452
<I/σ(I)>5.92
Completeness [%]99.999.3
Redundancy15.515.8
CC(1/2)0.9620.349
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52910.1M Bis-Tris pH5.5, 25% PEG 3350, 0.2M ammonium acetate

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