9FF5
The structure of G.kaustophilus T-1 ScoC-23bp dsDNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-30 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.87 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 88.205, 100.147, 96.606 |
Unit cell angles | 90.00, 112.33, 90.00 |
Refinement procedure
Resolution | 42.680 - 3.500 |
R-factor | 0.2353 |
Rwork | 0.233 |
R-free | 0.28240 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.387 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.680 | 3.620 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.146 | 0.940 |
Rmeas | 0.164 | 1.060 |
Rpim | 0.098 | 0.620 |
Number of reflections | 21515 | 4173 |
<I/σ(I)> | 6.6 | 1.5 |
Completeness [%] | 98.6 | |
Redundancy | 5.2 | |
CC(1/2) | 0.980 | 0.540 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 40% MPD and 0.08M Magnesium acetate |