9FF4
The structure of G.kaustophilus T-1 ScoC-17bp dsDNA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97 |
Spacegroup name | P 1 |
Unit cell lengths | 68.634, 70.546, 95.468 |
Unit cell angles | 89.77, 81.63, 60.91 |
Refinement procedure
Resolution | 48.480 - 2.800 |
R-factor | 0.2312 |
Rwork | 0.228 |
R-free | 0.29310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.191 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.480 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.080 | 0.660 |
Rmeas | 0.090 | 0.770 |
Rpim | 0.050 | 0.390 |
Number of reflections | 37515 | 4515 |
<I/σ(I)> | 6.3 | 1.6 |
Completeness [%] | 98.3 | |
Redundancy | 3.8 | |
CC(1/2) | 0.930 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 20% PEG 3350 and 0.3 M Magnesium formate dihydrate |