9FCM
Single-domain antibody binding the SARS-COV2 S2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-01-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.61990 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 90.413, 98.800, 150.763 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 82.640 - 1.940 |
R-factor | 0.2021 |
Rwork | 0.200 |
R-free | 0.24670 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.945 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | MoRDa |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.640 | 2.052 |
High resolution limit [Å] | 1.937 | 1.937 |
Rpim | 0.076 | |
Number of reflections | 39377 | 1969 |
<I/σ(I)> | 8.3 | |
Completeness [%] | 95.2 | |
Redundancy | 13.8 | |
CC(1/2) | 0.990 | 0.611 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M magnesium chloride hexahydrate, 0.1 M sodium citrate pH 5.0, and 15% PEG4000 |