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9FCM

Single-domain antibody binding the SARS-COV2 S2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2023-01-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.61990
Spacegroup nameI 2 2 2
Unit cell lengths90.413, 98.800, 150.763
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution82.640 - 1.940
R-factor0.2021
Rwork0.200
R-free0.24670
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.945
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwareMoRDa
Refinement softwarePHENIX (1.21_5207)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]82.6402.052
High resolution limit [Å]1.9371.937
Rpim0.076
Number of reflections393771969
<I/σ(I)>8.3
Completeness [%]95.2
Redundancy13.8
CC(1/2)0.9900.611
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M magnesium chloride hexahydrate, 0.1 M sodium citrate pH 5.0, and 15% PEG4000

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PDB entries from 2025-06-11

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