9F83
SARS-CoV-2 Nucleocapsid N-terminal domain (NTD) mutant D63G
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.976 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.013, 55.665, 84.895 |
Unit cell angles | 90.00, 95.15, 90.00 |
Refinement procedure
Resolution | 50.479 - 1.700 |
Rwork | 0.229 |
R-free | 0.28020 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 2.083 |
Data reduction software | autoPROC (1.17) |
Data scaling software | Aimless (0.7.13) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 84.550 | 84.550 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.078 | 0.049 | 1.101 |
Rmeas | 0.093 | 0.058 | 1.303 |
Rpim | 0.049 | 0.032 | 0.688 |
Number of reflections | 59866 | 440 | 3151 |
<I/σ(I)> | 12.1 | ||
Completeness [%] | 98.9 | ||
Redundancy | 6.6 | 6 | 6.8 |
CC(1/2) | 0.998 | 0.994 | 0.736 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 50mM HEPES pH 6.8 150mM Sodium Chloride 24% PEG 3350 2% PEG 400 |