9F3O
Crystal structure of the open state of apo Kluyveromyces lactis glucokinase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-09-30 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.91841 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 116.433, 116.433, 377.053 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.020 - 3.080 |
R-factor | 0.2151 |
Rwork | 0.213 |
R-free | 0.24890 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.476 |
Data reduction software | XDS (VERSION Feb 5, 2021 BUILT=20210205) |
Data scaling software | XSCALE (VERSION Feb 5, 2021 BUILT=20210205) |
Phasing software | PHASER (2.5.1) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.020 | 3.270 |
High resolution limit [Å] | 3.080 | 3.080 |
Number of reflections | 28489 | 4437 |
<I/σ(I)> | 15.9 | |
Completeness [%] | 98.7 | 97.2 |
Redundancy | 6.5 | 6.4 |
CC(1/2) | 0.998 | 0.794 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | droplet: 1:1 mixture of protein and reservoir protein supplemented with: 10 mM MgCl2 10 mM AMPPNP reservoir solution: 100 mM Na citrate (pH 3.0) 1.5 M Na malonate |