9F2Q
Crystal structure of Keap1 kelch domain in complex with a tetrahydroisoquinoline-based small molecule inhibitor at 1.2A resolution
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 61 |
Unit cell lengths | 103.136, 103.136, 55.206 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.660 - 1.200 |
R-factor | 0.1251 |
Rwork | 0.124 |
R-free | 0.14300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.045 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.960 | 1.220 |
High resolution limit [Å] | 1.200 | 1.200 |
Rmerge | 0.067 | 0.743 |
Rmeas | 0.071 | 0.835 |
Rpim | 0.022 | 0.369 |
Total number of observations | 25298 | |
Number of reflections | 104131 | 5001 |
<I/σ(I)> | 15.6 | 2.3 |
Completeness [%] | 99.9 | |
Redundancy | 9.5 | 5.1 |
CC(1/2) | 0.999 | 0.713 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 0.5 M AMMONIUM SULFATE, 0.1 M SODIUM CITRATE TRIBASIC DIHYDRATE PH 5.6 AND 1.0 M LITHIUM SULFATE MONOHYDRATE |