9F2G
Crystal structure of SARS-CoV-2 N-protein C-terminal domain (apo form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979260 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 92.704, 45.140, 109.061 |
Unit cell angles | 90.00, 93.96, 90.00 |
Refinement procedure
Resolution | 48.420 - 1.570 |
R-factor | 0.19093 |
Rwork | 0.189 |
R-free | 0.22854 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.531 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.420 | 1.600 |
High resolution limit [Å] | 1.570 | 1.570 |
Rpim | 0.019 | 0.531 |
Number of reflections | 123141 | 4598 |
<I/σ(I)> | 21.2 | 1.2 |
Completeness [%] | 97.4 | 74.1 |
Redundancy | 6.4 | 4.7 |
CC(1/2) | 0.999 | 0.647 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | PEG 3350 37%, 0.1 M Tris pH 8.5, 50 mM ammonium sulfate and 1 mM InsP6. Protein:precipitant ratio 1:1. Protein concentration: 16.5 mg/ml. Protein buffer: 20 mM Tris pH 8.0 and 150 mM NaCl. |