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9EZE

Structure of subdomain 3 of the Plasmodium vivx Duffy binding protein (PvDBP) bound to human antibody DB9

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-18
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9999
Spacegroup nameP 21 21 21
Unit cell lengths76.427, 126.191, 129.863
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution90.500 - 1.550
R-factor0.2053
Rwork0.204
R-free0.22320
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.120
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (26-JUL-2023))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.5001.605
High resolution limit [Å]1.5501.550
Number of reflections18037017671
<I/σ(I)>14.77
Completeness [%]98.3
Redundancy6.5
CC(1/2)0.9990.580
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2M ammonium acetate, 0.1M sodium acetate pH 4.0, 15% PEG 4000

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