9EX8
Free form of a mutant of SARS-CoV-2 main protease Mpro.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-04 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.8856 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 114.349, 53.239, 44.702 |
Unit cell angles | 90.00, 102.91, 90.00 |
Refinement procedure
Resolution | 43.570 - 1.800 |
R-factor | 0.1935 |
Rwork | 0.193 |
R-free | 0.21060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.750 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.040 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.076 | 1.502 |
Rmeas | 0.083 | 1.625 |
Rpim | 0.031 | 0.609 |
Number of reflections | 24239 | 1303 |
<I/σ(I)> | 11.3 | 1.1 |
Completeness [%] | 99.4 | |
Redundancy | 7.1 | |
CC(1/2) | 0.999 | 0.495 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.1 M MMT (DL-malic acid, MES, and Tris base in molar ratio 1:2:2), pH 7.0, 25% PEG 1500 |