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9EVY

SARS-CoV-2 Nucleocapsid N-terminal domain (NTD) mutant E136D

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2023-09-30
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97626
Spacegroup nameP 1 21 1
Unit cell lengths58.865, 55.099, 84.591
Unit cell angles90.00, 94.82, 90.00
Refinement procedure
Resolution84.290 - 1.550
R-factor0.21569
Rwork0.215
R-free0.23619
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareautoPROC (1.1.7)
Data scaling softwareAimless (0.7.13)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]84.29284.2901.580
High resolution limit [Å]1.5508.4901.550
Rmerge0.0530.0530.395
Rmeas0.0640.0660.478
Rpim0.0360.0390.267
Number of reflections766334793771
<I/σ(I)>1626.83.9
Completeness [%]97.991.397.5
Redundancy5.94.65.9
CC(1/2)0.9970.9930.924
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8293100mM BICINE pH 9.3 20% PEG 3350

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PDB entries from 2025-05-28

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