9ERP
Hydrogenase-2 Ni-SI state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.7749 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 99.180, 100.001, 167.814 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.280 - 1.370 |
R-factor | 0.1574 |
Rwork | 0.157 |
R-free | 0.17420 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.028 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | REFMAC |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.900 | 1.390 |
High resolution limit [Å] | 1.370 | 1.370 |
Rmerge | 0.190 | 3.720 |
Rpim | 0.038 | 0.398 |
Number of reflections | 348218 | 17125 |
<I/σ(I)> | 9.7 | 0.4 |
Completeness [%] | 100.0 | 99.4 |
Redundancy | 27.8 | 28.5 |
CC(1/2) | 0.999 | 0.398 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 296 | 100 mM bis tris pH 6 200 mM MgCl2 18-20% PEG 3350 |