Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9EQP

N-terminal domain of Infectious Bursal Disease Virus (IBDV) VP3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2016-07-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths50.687, 111.416, 277.012
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.600 - 3.500
R-factor0.2392
Rwork0.238
R-free0.25910
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.859
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX ((dev_4788: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.6003.680
High resolution limit [Å]3.5003.500
Rmerge0.1871.237
Rmeas0.2091.382
Rpim0.0910.596
Number of reflections199604736
<I/σ(I)>8.17
Completeness [%]97.698.2
Redundancy4.74.8
CC(1/2)0.9920.529
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8293.150.8 M LiSO4, 0.05 M Sodium Cacodylate pH6.0

236620

PDB entries from 2025-05-28

PDB statisticsPDBj update infoContact PDBjnumon