9EOL
N-acetylglucosamine 6-phosphate dehydratase: inhibited 6-phosphogluconic acid state of NagS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-06 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 87.668, 87.668, 278.810 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.470 - 1.690 |
R-factor | 0.1815 |
Rwork | 0.180 |
R-free | 0.20510 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.228 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.500 | 1.720 |
High resolution limit [Å] | 1.690 | 1.690 |
Number of reflections | 75437 | 2724 |
<I/σ(I)> | 20.9 | 1.7 |
Completeness [%] | 100.0 | |
Redundancy | 19.7 | |
CC(1/2) | 1.000 | 0.799 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 2.0 M Ammonium sulphate, 0.1 M BIS-Tris, pH 5.5; after crystallosation, crystals were soaked in mother liquor with 10-20% glycerol as cryoprotectant |