9EL4
Crystal Structure of SARS-CoV-2 Mpro mutant E166A with Pfizer Intravenous Inhibitor PF-00835231
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-09 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.321, 99.001, 58.833 |
Unit cell angles | 90.00, 108.04, 90.00 |
Refinement procedure
Resolution | 31.650 - 1.880 |
R-factor | 0.169 |
Rwork | 0.168 |
R-free | 0.20340 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.329 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER (1.19.2_4158) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.650 | 1.947 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.026 | 0.110 |
Number of reflections | 76307 | 4653 |
<I/σ(I)> | 17.53 | 5.96 |
Completeness [%] | 97.6 | 96.53 |
Redundancy | 2 | 2 |
CC(1/2) | 0.999 | 0.974 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 10-20 % (w/v) PEG 3350, 0.20-0.30 M NaCl, and 0.1 M Bis-Tris methane pH 5.5 |