9EIV
Rat cytosolic PEPCK in complex with GDP and phosphoglycolic acid (253K)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE 7B2 |
| Synchrotron site | CHESS |
| Beamline | 7B2 |
| Temperature [K] | 253 |
| Detector technology | PIXEL |
| Collection date | 2023-01-01 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 1.1271 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 44.711, 119.789, 60.074 |
| Unit cell angles | 90.00, 111.48, 90.00 |
Refinement procedure
| Resolution | 55.900 - 1.920 |
| R-factor | 0.1904 |
| Rwork | 0.188 |
| R-free | 0.22900 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.521 |
| Data reduction software | DIALS |
| Data scaling software | DIALS |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((1.21.2_5419: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 60.080 | 1.960 |
| High resolution limit [Å] | 1.920 | 1.920 |
| Rmerge | 0.076 | 1.457 |
| Rmeas | 0.082 | 1.576 |
| Rpim | 0.032 | 0.595 |
| Number of reflections | 44474 | 2244 |
| <I/σ(I)> | 10 | 0.3 |
| Completeness [%] | 98.2 | 97.18 |
| Redundancy | 6.69 | 6.92 |
| CC(1/2) | 0.998 | 0.627 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M HEPES pH 7.5, 0.5 uL of 100 mM MnCl2, 100 mM GDP, and 18-28% PEG 3350 |
