9E9M
Ligand Free Putative Ancestral Protein Tyrosine Phosphatase ShufPTP - C93-Cyclic Sulfenamide - Intermediate p-loop Conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2021-03-19 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 61 |
Unit cell lengths | 86.032, 86.032, 32.198 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.560 - 1.550 |
R-factor | 0.1867 |
Rwork | 0.185 |
R-free | 0.21190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.982 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.610 |
High resolution limit [Å] | 1.550 | 3.340 | 1.550 |
Rmerge | 0.062 | 0.042 | 0.534 |
Rmeas | 0.063 | 0.043 | 0.551 |
Rpim | 0.014 | 0.009 | 0.133 |
Total number of observations | 385923 | ||
Number of reflections | 19702 | 2095 | 1908 |
<I/σ(I)> | 23.4 | ||
Completeness [%] | 98.2 | 100 | 95.3 |
Redundancy | 19.6 | 20.8 | 16.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 10.5 | 298.15 | 8 mg/mL protein, 0.1 M CAPS, 30% PEG 400 at a 1:1:0.2 protein/well/additive screen. The additive screen contains 0.2 M (NH4)2SO4, 20-30% PEG 4000, and 10-35% glycerol. |