9DXI
Crystal structure of dimer Caenorhabditis elegans lipid binding protein 3 (LBP-3)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-02-10 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.976 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 45.731, 68.846, 103.891 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.090 - 2.170 |
| R-factor | 0.2219 |
| Rwork | 0.219 |
| R-free | 0.26820 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.574 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.21.2_5419: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.260 |
| High resolution limit [Å] | 2.170 | 4.700 | 2.170 |
| Rmerge | 0.201 | 0.102 | 1.310 |
| Rmeas | 0.212 | 0.109 | 1.417 |
| Rpim | 0.065 | 0.038 | 0.528 |
| Number of reflections | 17848 | 1929 | 1705 |
| <I/σ(I)> | 5.4 | ||
| Completeness [%] | 99.7 | 99.1 | 98.9 |
| Redundancy | 10.1 | 8.7 | 6.7 |
| CC(1/2) | 0.998 | 0.996 | 0.634 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 277 | 14% PEG 3350, 0.16 M NaCl, 0.1 M Sodium Citrate |






