9DUJ
Crystal structure of RufO in complex with (Nle)RYLH
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 19-ID |
| Synchrotron site | NSLS-II |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-09-27 |
| Detector | DECTRIS EIGER2 XE 9M |
| Wavelength(s) | 0.97857 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 56.258, 77.833, 89.178 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.580 - 1.510 |
| R-factor | 0.1646 |
| Rwork | 0.164 |
| R-free | 0.19080 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.870 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.540 |
| High resolution limit [Å] | 1.510 | 4.100 | 1.510 |
| Rmerge | 0.118 | 0.059 | 0.631 |
| Rmeas | 0.124 | 0.062 | 0.662 |
| Rpim | 0.035 | 0.017 | 0.199 |
| Total number of observations | 760297 | ||
| Number of reflections | 62065 | 3340 | 3051 |
| <I/σ(I)> | 9.5 | ||
| Completeness [%] | 100.0 | 99.8 | 100 |
| Redundancy | 12.3 | 12.1 | 10.5 |
| CC(1/2) | 0.995 | 0.998 | 0.925 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 279 | 20% (w/v) PEG 3000, 100 mM Tris base/HCl pH 7.0, 200 mM Calcium acetate |






