Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9DQI

D306N Mutant of M.tuberculosis MenD (SEPHCHC Synthase)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-19
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9537319
Spacegroup nameP 21 21 21
Unit cell lengths101.565, 139.978, 183.859
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.130 - 2.390
R-factor0.1969
Rwork0.195
R-free0.23110
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.621
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1302.430
High resolution limit [Å]2.3902.390
Rmerge0.1673.140
Rmeas0.1703.201
Rpim0.0330.618
Total number of observations2806983136691
Number of reflections1043275126
<I/σ(I)>16.71.1
Completeness [%]100.0
Redundancy26.926.7
CC(1/2)0.9990.579
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M MOPS/HEPES pH 7.5, 6% w/v PEG 8K, 12% v/v ethylene glycol, 0.03M halide mix (NaI, NaBr, NaF).

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon