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9DL7

Structure of proline utilization A complexed with 1-(4-fluorophenyl)thiourea

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2023-07-01
DetectorRDI CMOS_8M
Wavelength(s)1.000018
Spacegroup nameP 1 21 1
Unit cell lengths101.135, 101.867, 126.557
Unit cell angles90.00, 106.38, 90.00
Refinement procedure
Resolution46.970 - 1.720
R-factor0.2091
Rwork0.208
R-free0.24000
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.006
RMSD bond angle0.813
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21rc1_5156)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.9701.750
High resolution limit [Å]1.7201.720
Rmerge0.2172.356
Rmeas0.2382.544
Rpim0.0960.953
Total number of observations89890
Number of reflections50369612912
<I/σ(I)>6.20.6
Completeness [%]99.4
Redundancy6.57
CC(1/2)0.9810.397
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Reservoir contained 0.1 M HEPES, pH 7.5, 0.1 M sodium formate, 0.1 M magnesium chloride, 0.2 M ammonium sulfate, and 20% (w/v) PEG 3350. Crystal was soaked in cryobuffer containing 19 mM 1-(4-fluorophenyl)thiourea and 20% PEG 200

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PDB entries from 2025-12-10

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