9DGO
Designed miniproteins potently inhibit and protect against MERS-CoV. Crystal structure of MERS-CoV S RBD in complex with miniprotein cb3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2022-08-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.619, 76.291, 136.235 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.550 - 1.850 |
R-factor | 0.1913 |
Rwork | 0.190 |
R-free | 0.21890 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.843 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX ((1.21_5207-000)) |
Refinement software | PHENIX ((1.21.2_5419: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.550 | 1.950 |
High resolution limit [Å] | 1.850 | 1.880 |
Rmerge | 0.023 | |
Number of reflections | 55567 | 55567 |
<I/σ(I)> | 14.7 | |
Completeness [%] | 100.0 | |
Redundancy | 2 | |
CC(1/2) | 0.990 | 0.023 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | 0.16 M MgCl2, 0.08 M Tris-HCl pH 8.5, 24%(w/v) PEG4000, 20% (v/v) glycerol |