9DGK
The Retinoblastoma Protein with Mutation M704V
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-05-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | H 3 |
Unit cell lengths | 250.837, 250.837, 35.394 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.400 - 2.380 |
R-factor | 0.2239 |
Rwork | 0.220 |
R-free | 0.27740 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.507 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.400 | 2.470 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 33257 | 3459 |
<I/σ(I)> | 10.2 | |
Completeness [%] | 100.0 | |
Redundancy | 10.5 | |
CC(1/2) | 0.997 | 0.381 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 18% PEG 8K, 0.1M sodium citrate, 0.1M succinate pH 5.5, 1M lithium chloride |