9DGD
Tetrahydroprotoberberine N-methyltransferase in complex with boldine and SAH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 104.020, 104.020, 82.597 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.544 - 1.800 |
Rwork | 0.168 |
R-free | 0.18690 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.416 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0430) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.544 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 48088 | 2661 |
<I/σ(I)> | 14.84 | 1.14 |
Completeness [%] | 99.9 | 100 |
Redundancy | 12.9 | 11.5 |
CC(1/2) | 1.000 | 0.697 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.75 | 293 | 26% pentaerythritol ethoxylate, 15 mM ammonium sulfate, 0.1M Tris-Cl, 0.5 mM boldine, 0.5 mM SAM, 5% glycerol |