9DFT
G1 domain of human aggrecan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 121.480, 121.480, 213.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.380 - 3.500 |
R-factor | 0.203 |
Rwork | 0.198 |
R-free | 0.24450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.507 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 85.910 | 3.830 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.125 | 1.393 |
Rmeas | 0.133 | 1.476 |
Rpim | 0.044 | 0.664 |
Number of reflections | 20877 | 4880 |
<I/σ(I)> | 7.5 | 2.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.9 | |
CC(1/2) | 0.995 | 0.683 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1% (m/v) PEG 3,350, 100 mM Bis-Tris pH 5.5, 600 mM (NH4)2SO4 |