Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9DEX

Crystal structure of human peroxiredoxin 1 in complex with inhibitor WF-097

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-14
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.54
Spacegroup nameP 21 21 21
Unit cell lengths67.315, 78.799, 83.071
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.570 - 2.300
R-factor0.16325
Rwork0.162
R-free0.19236
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.559
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0349)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.340
High resolution limit [Å]2.3002.300
Rmerge0.1440.560
Rmeas0.1550.664
Rpim0.0660.350
Number of reflections20042844
<I/σ(I)>12.92.6
Completeness [%]99.3
Redundancy5.43.1
CC(1/2)0.710
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.32910.1 M HEPES pH 7.3, 1.8 M Ammonium Sulfate, 2% (v/v) PEG 1000

245011

PDB entries from 2025-11-19

PDB statisticsPDBj update infoContact PDBjnumon