9DE6
Structure of full-length HIV TAR RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.253, 41.982, 68.570 |
Unit cell angles | 90.00, 93.44, 90.00 |
Refinement procedure
Resolution | 35.790 - 2.350 |
R-factor | 0.2652 |
Rwork | 0.264 |
R-free | 0.28250 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.790 | 2.434 |
High resolution limit [Å] | 2.350 | 2.350 |
Number of reflections | 17435 | 8976 |
<I/σ(I)> | 14.38 | 1.63 |
Completeness [%] | 97.5 | |
Redundancy | 6.6 | |
CC(1/2) | 0.999 | 0.868 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.5 | 293 | 12 mM NaCl, 80 mM KCl, 50 mM sodium cacodylate pH 5.5, 2 mM hexamine cobalt and 45% v/v MPD |