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9DBB

Fe-Bound Structure of Computationally Designed Homotrimer Tet4

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2024-04-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.721950
Spacegroup nameH 3
Unit cell lengths70.740, 70.740, 54.080
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.540 - 2.500
R-factor0.2229
Rwork0.216
R-free0.28340
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.489
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17_3644)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.5402.591
High resolution limit [Å]2.5002.500
Rmerge0.0740.939
Rmeas0.0780.994
Rpim0.0240.322
Number of reflections69851109
<I/σ(I)>17.242.24
Completeness [%]99.899.46
Redundancy9.99.1
CC(1/2)0.9990.847
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529823% PEG 400, 200 mM CaCl2, 100 mM Tris (pH 8.5)

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PDB entries from 2026-01-14

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