9D9Y
Human norovirus GI.1 Norwalk protease in complex with rupintrivir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00003 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 118.464, 118.464, 66.571 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.980 - 1.800 |
R-factor | 0.1756 |
Rwork | 0.175 |
R-free | 0.19810 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.291 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21rc1_5156) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.980 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.090 | 0.834 |
Rmeas | 0.096 | 0.887 |
Rpim | 0.032 | 0.336 |
Number of reflections | 44383 | 2155 |
<I/σ(I)> | 11.1 | 2.6 |
Completeness [%] | 100.0 | 99.86 |
Redundancy | 8.7 | 8.3 |
CC(1/2) | 0.998 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.2 M Lithium sulfate, 0.1M Tris, 1.0 M Sodium/Potassium tartrate |