9D87
FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, unbound dimer crystal form 8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-30 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.954 |
Spacegroup name | P 2 3 |
Unit cell lengths | 105.698, 105.698, 105.698 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.370 - 2.300 |
R-factor | 0.219 |
Rwork | 0.218 |
R-free | 0.23650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.999 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.8) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.270 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.080 | 2.750 |
Rmeas | 0.081 | 2.796 |
Rpim | 0.015 | 0.502 |
Total number of observations | 539288 | 50595 |
Number of reflections | 17790 | 1680 |
<I/σ(I)> | 32.8 | 1.6 |
Completeness [%] | 99.8 | |
Redundancy | 30.3 | 30.1 |
CC(1/2) | 1.000 | 0.654 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289.15 | 0.3 uL ~11 mg/mL FphE (10 mM HEPES pH 7.5 , 100 mM NaCl) were mixed with 0.15 uL of reservoir solution. Sitting drop reservoir contained 25 uL of 0.18 M Potassium thiocyanate, 0.1 M TRIS pH 8.5 and 22.5% w/v Polyethylene glycol monomethyl ether 2,000. Crystal was frozen in a solution of ~25% glycerol, 75% reservoir after ~10s soaking in that solution. |