9D1I
Structure of Ubiquitin bound to KLHDC3-EloB/C
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2022-04-27 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.97872 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 114.709, 121.440, 153.142 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 38.290 - 2.000 |
| R-factor | 0.1677 |
| Rwork | 0.167 |
| R-free | 0.18890 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.899 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
| High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
| Rmerge | 0.101 | 0.071 | 0.553 |
| Rmeas | 0.107 | 0.075 | 0.590 |
| Rpim | 0.035 | 0.025 | 0.202 |
| Total number of observations | 632350 | ||
| Number of reflections | 72013 | 7508 | 7041 |
| <I/σ(I)> | 4.5 | ||
| Completeness [%] | 99.8 | 99.9 | 98.3 |
| Redundancy | 8.8 | 8.9 | 7.5 |
| CC(1/2) | 0.984 | 0.987 | 0.903 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 10%PEG5KMME, 0.1M HEPES pH=7.0, 5% Tascsimate pH=7.0 |






