9CU3
Allosteric mechanism of DriD transcription activator
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-04-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.02 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 88.796, 88.796, 141.523 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.400 - 1.900 |
R-factor | 0.2033 |
Rwork | 0.202 |
R-free | 0.23090 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.840 |
Data reduction software | XDS (8.0.012) |
Data scaling software | Aimless (8.0.012) |
Phasing software | PHASER (1.21-5207) |
Refinement software | PHENIX (1.21-5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.730 | 2.310 |
High resolution limit [Å] | 1.900 | 2.190 |
Rmerge | 0.086 | 0.574 |
Rmeas | 0.092 | 0.676 |
Rpim | 0.032 | 0.347 |
Total number of observations | 12020 | |
Number of reflections | 46532 | 3557 |
<I/σ(I)> | 10.4 | -0.4 |
Completeness [%] | 95.1 | |
Redundancy | 7.9 | 3.4 |
CC(1/2) | 0.997 | 0.911 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298.15 | Ammonium sulfate dibasic, sodium cacodylate trihydrate |