9CPT
Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies M22-92 and CC12.3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97934 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 291.994, 105.297, 55.499 |
Unit cell angles | 90.00, 93.06, 90.00 |
Refinement procedure
Resolution | 30.070 - 3.510 |
R-factor | 0.2257 |
Rwork | 0.221 |
R-free | 0.26940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.447 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.21rc1_5127: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.070 | 3.610 |
High resolution limit [Å] | 3.510 | 3.510 |
Rmerge | 0.311 | 0.873 |
Number of reflections | 20910 | 1423 |
<I/σ(I)> | 6 | 2.1 |
Completeness [%] | 99.1 | 92.4 |
Redundancy | 6.9 | 7 |
CC(1/2) | 0.967 | 0.752 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M sodium citrate citric acid buffer (pH 4), 25% (v/v) polyethylene glycol 200, and 5% (w/v) polyethylene glycol 6000 |