9CJT
X-ray crystal structure of SARS-CoV-2 main protease quadruple mutants in complex with Bofutrelvir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979493 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.630, 53.886, 45.090 |
Unit cell angles | 90.00, 102.20, 90.00 |
Refinement procedure
Resolution | 34.220 - 1.920 |
R-factor | 0.2301 |
Rwork | 0.228 |
R-free | 0.27840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond angle | 10.109 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.300 | 2.130 |
High resolution limit [Å] | 1.920 | 1.920 |
Rmerge | 0.054 | 0.600 |
Rmeas | 0.064 | 0.717 |
Rpim | 0.035 | 0.389 |
Number of reflections | 13817 | 691 |
<I/σ(I)> | 7.2 | |
Completeness [%] | 85.5 | |
Redundancy | 3.2 | |
CC(1/2) | 0.998 | 0.702 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | J582,D03_10: 0.1 M MMT, pH 6.0, 25% w/v PEG1500 |