9CIS
Crystal structure of the pyrophosphate-dependent phosphofructokinase from Candidatus Prometheoarchaeum syntrophicum with fructose 6-phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-30 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.95366 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 85.210, 71.866, 136.530 |
Unit cell angles | 90.00, 91.08, 90.00 |
Refinement procedure
Resolution | 45.500 - 2.350 |
R-factor | 0.2471 |
Rwork | 0.244 |
R-free | 0.31440 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.979 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.500 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.290 | 8.630 |
Rmeas | 0.300 | 8.940 |
Rpim | 0.080 | 2.350 |
Number of reflections | 69107 | 4391 |
<I/σ(I)> | 8 | |
Completeness [%] | 99.8 | |
Redundancy | 14.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 291 | 1 M MMT pH 9.0, 25 % PEG 1500 |