9CH4
Crystal structure of shark nonclassical MHC CLASS I, UGA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2022-11-11 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979180 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 165.773, 95.628, 112.372 |
| Unit cell angles | 90.00, 123.96, 90.00 |
Refinement procedure
| Resolution | 93.200 - 2.670 |
| R-factor | 0.2405 |
| Rwork | 0.239 |
| R-free | 0.26170 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.625 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 93.200 | 2.780 |
| High resolution limit [Å] | 2.670 | 2.670 |
| Rmerge | 0.291 | 1.550 |
| Rmeas | 0.314 | 1.674 |
| Rpim | 0.119 | 0.627 |
| Total number of observations | 288789 | 32111 |
| Number of reflections | 41251 | 4586 |
| <I/σ(I)> | 6.5 | 1.3 |
| Completeness [%] | 99.6 | |
| Redundancy | 7 | 7 |
| CC(1/2) | 0.987 | 0.522 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | Morpheus H8: 37.5 % v/v Precipitant Mix 4 (25% v/v MPD; 25% PEG 1000; 25% w/v PEG 3350), 0.1 M Sodium HEPES; MOPS (acid) pH 7.5, 0.1 M Amino acids |






