Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9CDU

Crystal Structure of Rhombotarget A-peptide Complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2024-03-28
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.92010
Spacegroup nameP 21 21 2
Unit cell lengths102.778, 169.837, 59.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.560 - 2.610
R-factor0.2151
Rwork0.212
R-free0.25870
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.475
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_5246)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.5602.750
High resolution limit [Å]2.6102.610
Rmerge0.1511.470
Rpim0.0880.840
Number of reflections325914662
<I/σ(I)>6.61
Completeness [%]99.9100
Redundancy4.64.8
CC(1/2)0.9940.409
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.2 M Lithium sulfate, 0.1 M Tris pH 8.5 and 40 % v/v PEG 400

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon