9CDT
Crystal Structure of MCL-1-Peptide Complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-02-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92010 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.484, 75.366, 43.371 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.430 - 2.100 |
R-factor | 0.2218 |
Rwork | 0.216 |
R-free | 0.27160 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.477 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_4761) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.430 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.093 | 0.860 |
Rpim | 0.035 | 0.324 |
Number of reflections | 10245 | 1470 |
<I/σ(I)> | 11.85 | 2.3 |
Completeness [%] | 97.3 | 99.93 |
Redundancy | 7.8 | 7.7 |
CC(1/2) | 0.998 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.2 M Sodium chloride, 0.1 M Bis-Tris pH 6.5, and 25% w/v Polyethylene glycol 3,350 |