9C9F
Crystal structures fluoroacetate dehalogenase D4B from Delftia acidovorans strain D4B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95374 |
Spacegroup name | P 1 |
Unit cell lengths | 42.936, 83.778, 84.917 |
Unit cell angles | 101.60, 96.03, 94.67 |
Refinement procedure
Resolution | 39.410 - 1.980 |
R-factor | 0.2226 |
Rwork | 0.221 |
R-free | 0.24770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.838 |
Data reduction software | XDS (Jan 10, 2022) |
Data scaling software | Aimless (0.7.9) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.538 | 2.016 |
High resolution limit [Å] | 1.980 | 1.980 |
Rmerge | 0.181 | 1.315 |
Rmeas | 0.220 | 1.630 |
Rpim | 0.123 | 0.948 |
Number of reflections | 77693 | 3823 |
<I/σ(I)> | 3 | 0.5 |
Completeness [%] | 97.6 | 97 |
Redundancy | 3 | 2.8 |
CC(1/2) | 0.985 | 0.310 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 14 mg/ml 25 %(w/v) Polyethylene glycol 3350, 0.2 M Ammonium acetate, 0.1 M Tris-HCl pH 8.5 |