9C8N
Crystal Structure of human cyclic GMP-AMP synthase in complex with AMPPNP and compound 1
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-11 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 51.795, 60.047, 128.344 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.230 - 1.550 |
R-factor | 0.1907 |
Rwork | 0.190 |
R-free | 0.21440 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.452 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.230 | 1.590 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.089 | |
Number of reflections | 58486 | 4149 |
<I/σ(I)> | 19.3 | |
Completeness [%] | 99.6 | |
Redundancy | 7.2 | |
CC(1/2) | 0.999 | 0.805 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M Tris pH 8.0, 0.1 M Lithium Sulfate, 20% PEG 4000 |