9BXK
OvsM from Marinimicrobium koreense, an ovoselenol-biosynthetic N-methyltransferase in complex with 5-selenohistidine and SAH
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE 7B2 |
Synchrotron site | CHESS |
Beamline | 7B2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-19 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.9686 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 83.838, 90.058, 80.321 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.000 - 1.660 |
R-factor | 0.1787 |
Rwork | 0.178 |
R-free | 0.20510 |
Structure solution method | SIR |
RMSD bond length | 0.011 |
RMSD bond angle | 1.207 |
Data reduction software | XDS (XDS-Apple_M1) |
Data scaling software | XDS (XDS-Apple_M1) |
Phasing software | PHASER (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.000 | 1.719 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmerge | 0.053 | 0.697 |
Rmeas | 0.075 | 0.985 |
Rpim | 0.053 | 0.697 |
Number of reflections | 35794 | 3373 |
<I/σ(I)> | 9.95 | 1.2 |
Completeness [%] | 98.8 | 95.33 |
Redundancy | 1.9 | 1.9 |
CC(1/2) | 0.997 | 0.521 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M Tris-HCl, pH 8.5, 0.2 M tri-sodium citrate, 30% v/v PEG400 |