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9BVX

SARS-CoV-2 main protease bound to inhibitor YR-C-155

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-002
Temperature [K]120
Detector technologyPIXEL
Collection date2023-04-24
DetectorBruker PHOTON II
Wavelength(s)1.54301
Spacegroup nameI 1 2 1
Unit cell lengths51.590, 80.730, 90.143
Unit cell angles90.00, 97.14, 90.00
Refinement procedure
Resolution47.020 - 1.800
R-factor0.1831
Rwork0.182
R-free0.20800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.297
Data reduction softwarePROTEUM PLUS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.0201.864
High resolution limit [Å]1.8001.800
Rmerge0.0230.045
Rmeas0.0320.063
Rpim0.0230.045
Number of reflections333623340
<I/σ(I)>18.3210.3
Completeness [%]98.1
Redundancy2
CC(1/2)0.9980.993
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2890.2 M Ammonium phosphate dibasic, 17% W/v PEG3350, pH8.0

237735

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