9BS3
Wild type DNA Ligase 1 with 5'-rG:C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 71.348, 117.287, 104.048 |
Unit cell angles | 90.00, 98.82, 90.00 |
Refinement procedure
Resolution | 24.860 - 2.690 |
R-factor | 0.2096 |
Rwork | 0.208 |
R-free | 0.24900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.557 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.750 |
High resolution limit [Å] | 2.690 | 2.690 |
Rmeas | 0.184 | 0.809 |
Rpim | 0.074 | 0.313 |
Number of reflections | 45825 | 2314 |
<I/σ(I)> | 13 | 1.8 |
Completeness [%] | 97.6 | |
Redundancy | 6.2 | |
CC(1/2) | 0.980 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 298.15 | 100mM MES pH 5.3, 18% PEG3350, 100mM Lithium Acetate. |