9BR6
Crystal structure of human succinyl-CoA:glutarate-CoA transferase (SUGCT)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-22 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.920105 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 91.083, 115.126, 79.220 |
Unit cell angles | 90.00, 100.79, 90.00 |
Refinement procedure
Resolution | 44.740 - 2.400 |
R-factor | 0.222 |
Rwork | 0.221 |
R-free | 0.23900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.532 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.840 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.110 | 1.593 |
Rmeas | 0.130 | 1.925 |
Rpim | 0.068 | 1.069 |
Total number of observations | 110121 | 10391 |
Number of reflections | 31313 | 3265 |
<I/σ(I)> | 7 | 0.8 |
Completeness [%] | 99.8 | |
Redundancy | 3.5 | 3.2 |
CC(1/2) | 0.996 | 0.406 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 300 | 0.2 M NaCl, 0.1 M Tris, pH 8.5, 25% PEG 3,350 |