9BOC
Crystal Structure of L50F SARS-CoV-2 Main Protease in Complex with GC376
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-09-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97933 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.714, 53.061, 45.603 |
Unit cell angles | 90.00, 102.83, 90.00 |
Refinement procedure
Resolution | 44.460 - 1.680 |
R-factor | 0.1906 |
Rwork | 0.190 |
R-free | 0.20780 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.917 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.460 | 1.740 |
High resolution limit [Å] | 1.680 | 1.680 |
Rmerge | 0.076 | 1.069 |
Number of reflections | 29610 | 2929 |
<I/σ(I)> | 11.66 | 1.3 |
Completeness [%] | 97.8 | 96.63 |
Redundancy | 4.2 | 3.7 |
CC(1/2) | 0.998 | 0.502 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 294 | 0.1 M BICINE, 15% w/v Polyethylene glycol 1,500 |