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9BKS

Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ADP

Replaces:  7UW7
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-22
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97918
Spacegroup nameP 21 21 21
Unit cell lengths30.371, 33.671, 66.421
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.050 - 1.170
R-factor0.15089
Rwork0.150
R-free0.17251
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.495
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.190
High resolution limit [Å]1.1703.1801.170
Rmerge0.0520.0420.214
Rmeas0.0570.0460.251
Rpim0.0220.0180.129
Total number of observations153097
Number of reflections233211312936
<I/σ(I)>11.5
Completeness [%]98.398.983
Redundancy6.66.33.3
CC(1/2)0.9990.9970.927
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529112.5% MPD, 12.5% PEG1000, 12.5% PEG3350, 0.1 M Sodium Hepes, MOPS pH 7.5, 0.09 M Sodium nitrate, 0.09 M Sodium phosphate dibasic, 0.09 M Ammonium sulfate

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PDB entries from 2024-07-31

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