9BF8
SARS-CoV-2 Papain-like Protease (PLpro) Untagged Crystal Structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2023-11-19 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 82.342, 82.342, 136.407 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.600 - 1.850 |
R-factor | 0.1779 |
Rwork | 0.177 |
R-free | 0.20180 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.032 |
Data reduction software | autoPROC (1.0.5 (20211020)) |
Data scaling software | XDS (BUILT 20230630) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.600 | 5.024 |
High resolution limit [Å] | 1.850 | 1.853 |
Rmerge | 0.180 | |
Rmeas | 0.185 | |
Rpim | 0.043 | |
Number of reflections | 46024 | 2489 |
<I/σ(I)> | 10.5 | |
Completeness [%] | 99.7 | |
Redundancy | 19.4 | |
CC(1/2) | 0.996 | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277.15 | Monosodium phosphate, dipotassium phosphate, tris-HCl, sucrose |